get_emp_freq            Derive empirical frequencies of states
print.dep_model         Print method for dep_model objects
run_dep_model           Run a dependent discrete-character model
scale_trees             Scale branch lengths of phylogenetic trees
tdata                   Example trait dataset
tdata2                  Example trait dataset (60 taxa)
ttree                   Example phylogenetic tree
ttree2                  Example phylogenetic trees (500 trees)
