amadeus 2.0.0
Major
updates to code base - breaking changes have been minmized but please
report if 1.3.x versions are not working as expected
- Refactored code base to improve maintainability and utilize modern R
API designs and best practices
- The only breaking change that should affect previous version users
is the
process_tri() and calculate_tri()
series.
Spatial
and Temporal summarization with .by and
.by_time parameters
- Added
.by and .by_time parameters to all
calculate_*() functions for consistent spatial and temporal
summarization options across all datasets
- The default behavior of
calculate_*() functions remains
unchanged - i.e., no summarization, returning extracted or summarized
values at the temporal resolution of the data - but users can now
specify .by for spatial grouping (e.g., by HUC, county,
state) and .by_time for temporal grouping (e.g., by year,
month) to obtain summarized covariate values directly from the
calculation step
‘frac’
option for categorical variable covariate calculation
hms, koppen, and ecoregion
datasets now have optional fraction covariate calculation that returns
the fraction of each category in the radius buffer.
drop
options for categorical variable covariate calculation
hms, koppen, and ecoregion
datasets now have optional drop parameter that will drop or
exclude categories that don’t have any coverage in the radius buffer for
a given point, which can help reduce the number of columns returned when
many categories are possible but only a few are present in the area
around the point.
Detailed
vignettes for each dataset including available variables, spatial and
temporal resolution, and example use cases
- workflow vignette for each dataset with detailed information on
available variables, spatial and temporal resolution, and example use
cases for each dataset
- Moved nhdplusTools from Imports to Suggests and added
requireNamespace("nhdplusTools") checks in all functions
that use it
Additional MODIS products
- Added support for additional MODIS products with a focus on the
burned area and active fire products
Finalize
data API that were previously in development
- Added or completed the functonality for PRISM, EDGAR, CropScape, and
HUC datasets
Use
of GitHub Copilot for code generation and refactoring
- Used GitHub Copilot for help with code generation and refactoring
across the code base, including function development, documentation, and
unit tests; all generated code was reviewed and edited by the
development team to ensure accuracy and consistency with package
standards
Drought Index Support
- Added
download_drought(),
process_drought(), and calculate_drought()
supporting three drought datasets:
- All three datasets are accessible via the top-level wrappers:
download_data(), process_covariates(), and
calculate_covariates() using aliases
"drought", "spei", "eddi", or
"usdm" for dataset_name /
covariate.
process_drought() returns a SpatRaster
(SPEI/EDDI) or SpatVector polygons (USDM), both with CRS
EPSG:4326.
calculate_drought() supports .by /
.by_time post-extraction summarization consistent with all
other calculate_*() functions.
Migrate from wget/curl to
httr2
- Completed migration of all
download_* functions from
httr/wget/curl command-line calls
to httr2 for all network requests
- Deprecated
download parameter (use default
download = TRUE) and remove_command parameter
across all download functions; both now emit informative warnings and
are ignored
- Added
hash parameter to all download_*
functions for optional MD5 file integrity verification via
download_hash() (using system md5sum)
- Added
unzip and remove_zip parameters to
download_prism() for post-download archive handling
- Added
download_run_method() internal helper for unified
httr2-based file retrieval with progress reporting, retry logic, and
rate limiting
- Improved
check_url_status() for general-purpose URL
validation
- Expanded unit test coverage with mock-based tests for all download
functions covering deprecation warnings, hash paths, and file-exists
branches
- Added full variable reference to
download_narr()
documentation, listing all 88 available NARR variable abbreviations with
descriptions grouped by category (monolevel, pressure level,
subsurface); resolves #194
- Added
download_narr() tests covering every variable
abbreviation across all three variable categories
- Fixed
download_data() dispatch to include
"edgar" so download_edgar() is reachable via
the wrapper function
amadeus 1.3.2
- Fixed deprecated file paths for NLCD, MODIS, and Ecoregions
datasets
- Removed the certificate verification from ecoregion download which
is not needed anymore
- For NASA datasets MODIS, VIIRS, and Geos-CF, added additional tags
in the wget scripts to prevent API throttling
- httr upgraded to httr2
- Modified internal URL status check function for general use
- Added the news function to display the NEWS.md content within R
pkgdown site
- Improved the reporting in the GitHub Actions workflows
amadeus 1.2
future and future.apply dependencies were
removed
nthreads argument is removed from
calculate_modis_par() and
calculate_nlcd()
calculate_modis_par() is renamed to
calculate_modis()
amadeus 1.1
calc_*() functions are renamed to
calculate_*() per naming convention of other function
family in the package
amadeus 1.0
- First CRAN release (v.1.0.0)